MOVED - Sequencing and Error
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Number of threads: 19
Number of posts: 64
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by: adragonflyadragonfly
01 Aug 2012 23:05
2 by ThassoThasso
02 Aug 2012 09:34 Jump!
by: Albi (guest)
25 Jul 2012 21:32
4 by Albi (guest)
26 Jul 2012 14:01 Jump!
I am unable to run flux simulator successfully using "filtering TRUE" and/or "PCR_DISTRIBUTION" default
by: adragonflyadragonfly
13 Jul 2012 12:56
3 by adragonflyadragonfly
17 Jul 2012 12:32 Jump!
by: Albi (guest)
11 Jun 2012 14:08
3 by ThassoThasso
22 Jun 2012 17:41 Jump!
1 Some reads(a small portion)are shorter than what I expected. 2 whether those partially falled read also got truncated?
by: Xiao Ling (guest)
09 Jun 2012 06:01
6 by gmichagmicha
18 Jun 2012 15:44 Jump!
Error model ( err file) format
by: bogdan (guest)
14 Mar 2012 16:33
2 by ThassoThasso
21 Mar 2012 19:47 Jump!
by: Nazi (guest)
10 Jun 2011 16:53
3 by vinothkumar (guest)
09 Jan 2012 05:54 Jump!
by: Jonas Behr (guest)
09 Nov 2011 15:58
2 by Jennifer ParkerJennifer Parker
09 Nov 2011 20:46 Jump!
I generated an error file following the spec , but it crashes the simulator
by: Joshua Dunn (guest)
12 Aug 2011 02:41
1  
by: Andi (guest)
20 Jun 2011 08:26
1  
how the chromosome intervalls are determined that when put together form a read?
by: Marvin Mundry (guest)
13 Aug 2009 12:54
4 by gmichagmicha
17 Jun 2011 14:32 Jump!
Fasta fragment length not consistent. Some fragments less than 36bp, longest Fragment 900bp How can I make this consistently 36 bp?
by: Steven Hart (guest)
03 Feb 2011 15:08
6 by gmichagmicha
17 Jun 2011 14:23 Jump!
Throws an error after zipping. No progress. What is wrong?
by: Steven Hart (guest)
24 Jan 2011 20:28
4 by gmichagmicha
17 Jun 2011 14:13 Jump!
command line version of FluxSimulator aborting during sequencing stage
by: W C (guest)
28 Jul 2010 23:19
4 by gmichagmicha
17 Jun 2011 13:48 Jump!
need to quickly generate an mRNAseq data set in fastq format. but I don't have an error model. Help!
by: x.y. Liu (guest)
02 Sep 2010 14:59
1  
reads that are shorter than the desired length
by: gmichagmicha
16 May 2010 20:10
1  
How does it work?
by: Mikael (guest)
16 Apr 2010 13:47
9 by gmichagmicha
14 May 2010 20:13 Jump!
How are mRNA poly-A tails represented in the FASTA/QFASTA output
by: Marty McFlyMarty McFly
11 Aug 2009 22:43
6 by gmichagmicha
12 Aug 2009 23:04 Jump!
The Simulator GTF output contains "gene" features where "start" and "end" coordinates aparently do not coincide with genes annotated in the "gene_id" attribute.
by: Jennifer ParkerJennifer Parker
11 Aug 2009 23:26
2 by gmichagmicha
11 Aug 2009 23:30 Jump!
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